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Publications in 2014

  • Aladag A, Hoffmann S, Stoldt M, Bösing C, Willbold D, Schwarten M 
    Hepatitis C virus NS5A is able to competitively displace c-Myc from the Bin1 SH3 domain in vitro 
    J. Pept. Science 20, 334-340 (2014) 
  • Arslan Z, Hermanns V, Wurm R, Wagner R, Pul U 
    Detection and characterization of spacer integration intermediates in type I-E CRISPR-Cas system 
    Nucleic Acids Res 42, 7884-7893 (2014) 
    http://dx.doi.org/10.1093/nar/gku510  
  • Borshchevskiy V, Round E, Erofeev I, Weik M, Ishchenko A, Gushchin I, Mishin A, Willbold D, Büldt G, Gordeliy V 
    Ultra-low dose X-ray radiation induces structural alterations in proteins 
    Acta Cryst. D 70, 2675-2685 (2014) 
  • Elter S, Raschle T, Arens S, Viegas A, Gelev V, Etzkorn M, Wagner G 
    The use of amphipols for NMR structural characterization of 7-TM proteins 
    J. Membr. Biol. 247, 957-964 (2014) 
    http://dx.doi.org/10.1007/s00232-014-9669-5  
  • Etzkorn M, Zoonens M, Catoire LJ, Popot JL, Hiller S 
    How Amphipols Embed Membrane Proteins: Global Solvent Accessibility and Interaction with a Flexible Protein Terminus 
    J. Membr. Biol. 247, 965-970 (2014) 
    http://dx.doi.org/10.1007/s00232-014-9657-9  
  • Frenzel D, Glück JM, Brener O, Oesterhelt F, Nagel-Steger L, Willbold D 
    Immobilization of homogeneous monomeric, oligomeric and fibrillar Aβ species for reliable SPR measurements 
    PLoS ONE 9, e89490 (2014) 
  • Frenzel D, Willbold D 
    Kinetic titration series with biolayer interferometry 
    PLoS ONE 9, e106882 (2014) 
  • Gauhar A, Shaykhalishahi H, Gremer L, Mirecka EA, Hoyer W 
    Impact of subunit linkages in an engineered homodimeric binding protein to alpha-synuclein 
    Protein Eng. Des. Sel. 27, 473-479 (2014) 
    http://dx.doi.org/10.1093/protein/gzu047  
  • Grüning CS, Mirecka EA, Klein AN, Mandelkow E, Willbold D, Marino SF, Stoldt M, Hoyer W 
    Alternative conformations of the tau repeat domain in complex with an engineered binding protein 
    J. Biol. Chem. 289, 23209-23218 (2014) 
    http://dx.doi.org/10.1074/jbc.M114.560920  
  • Hänel K, Möckel L, Brummel M, Peiris K, Hartmann R, Dingley AJ, Willbold D, Loidl-Stahlhofen A 
    Expression and purification of soluble HIV-2 viral protein R (Vpr) using a sandwich-fusion protein strategy 
    Prot. Expr. Purific. 95, 156-161 (2014) 
    http://www.sciencedirect.com/science/article/pii/S1046592813002763  
  • Hung Y-F, Valdau O, Schünke S, Stern O, Koenig BW, Willbold D, Hoffmann S 
    Recombinant production of the amino terminal cytoplasmic region of dengue virus non-structural protein 4A for structural studies 
    PLoS ONE 9, e86482 (2014) 
    Link  
  • Kowal J, Chami M, Baumgartner P, Arheit M, Chiu PL, Rangl M, Scheuring S, Schröder GF, Nimmigean CM, Stahlberg H 
    Ligand-induced structural changes in the cyclic nucleotide-modulated potassium channel MloK1 
    Nat Commun 5, 3106 (2014) 
  • Lu A, Magupalli VG, Ruan J, Yin Q, Atianand MK, Vos M, Schröder GF, Fitzgerald KA, Wu H, and Egelman EH 
    Unified Polymerization Mechanism for the Assembly of ASC-Dependent Inflammasomes 
    Cell 156, 1193-1206 (2014) 
    http://dx.doi.org/10.1016/j.cell.2014.02.008  
  • Ma P, Haller JD, Zajakala J, Macek P, Sivertsen AC, Willbold D, Boisbouvier J, Schanda P 
    Probing transient conformational States of proteins by solid-state r1ρ relaxation-dispersion NMR spectroscopy. 
    Angew. Chem. Int. Ed. Engl. 53, 4312–4317 (2014) 
  • Matousek J, Piernikarczyk RJJ, Dědič P, Mertelík J, Uhlířová K, Duraisamy GS, Orctová L, Kloudová K, Ptáček J, Steger G 
    Characterization of Potato spindle tuber viroid (PSTVd) incidence and new variants from ornamentals 
    Europ J Plant Path 138, 93-101 (2014) 
    http://dx.doi.org/10.1007/s10658-013-0304-6  
  • Mirecka EA, Gremer L, Schiefer S, Oesterhelt F, Stoldt M, Willbold D, Hoyer W 
    Engineered aggregation inhibitor fusion for production of highly amyloidogenic human islet amyloid polypeptide 
    J. Biotechnol. 191, 221-227 (2014) 
    http://dx.doi.org/10.1016/j.jbiotec.2014.06.006  
  • Mirecka EA, Shaykhalishahi H, Gauhar A, Akgül S, Lecher J, Willbold D, Stoldt M, Hoyer W 
    Sequestration of a beta-hairpin for control of alpha-synuclein aggregation 
    Angew. Chem. Int. Ed. 53, 4227-4230 (2014) 
    http://dx.doi.org/10.1002/anie.201309001  
    http://dx.doi.org/10.1002/ange.201309001  
  • Müller H, Brener O, Andreoletti O, Piechatzek T, Willbold D, Legname G, Heise H 
    Progress toward structural understanding of infectious sheep PrP-amyloid 
    Prion 8, 344-358 (2014) 
  • Olubiyi OO, Frenzel D, Bartnik D, Glück JM, Brener O, Nagel-Steger L, Funke SA, Willbold D, Strodel B 
    Amyloid aggregation inhibitory mechanism of arginine-rich D-peptides 
    Curr. Med. Chem. 21, 1448-1457 (2014) 
  • Patra D, Fasold M, Langenberger D, Steger G, Grosse I, Stadler, PF 
    plantDARIO: web based quantitative and qualitative analysis of small RNA-seq data in plants 
    Frontiers in Plant Science 5, (2014) 
    http://dx.doi.org/10.3389/fpls.2014.00708  
  • Polovinkin V, Balandin T, Volkov O, Round E, Borshchevskiy V, Utrobin P, von Stetten D, Royant A, Willbold D, Arzumanyan G, Chupin V, Popot JL, Gordeliy V 
    Nanoparticle Surface-Enhanced Raman Scattering of Bacteriorhodopsin Stabilized by Amphipol A8-35 
    J. Membr. Biol. 247, 997-980 (2014) 
  • Polovinkin V, Gushchin I, Sintsov M, Round E, Balandin T, Chervakov P, Schevchenko V, Utrobin P, Popov A, Borshchevskiy V, Mishin A, Kuklin A, Willbold D, Chupin V, Popot JL, Gordeliy V 
    High-Resolution Structure of a Membrane Protein Transferred from Amphipol to a Lipidic Mesophase 
    J. Membr. Biol. 247, 997-1004 (2014) 
  • Pul U 
    Chemical and enzymatic footprint analyses of R-Loop formation by Cascade-crRNA complex 
    Meth. Mol. Biol. 1311, 293-305 (2014) 
  • Riesner D, Steger G 
    Temperature-gradient gel-electrophoresis. 
    In Bindereif, A., Hartmann, R., Schön, A. & Westhof, E. (eds), Handbook of RNA Biochemistry, Part II, 2nd edition, Wiley-VCH , 427-444 (2014) 
    http://dx.doi.org/10.1002/9783527647064.ch21  
  • Schröder GF, Levitt M, Brunger AT 
    Deformable elastic network refinement for low-resolution macromolecular crystallography 
    Acta Cryst. D D70, 2241-2255 (2014) 
  • Steger G 
    Secondary Structure Prediction. 
    In Bindereif, A., Hartmann, R., Schön, A. & Westhof, E. (eds), Handbook of RNA Biochemistry, Part III, 2nd edition, Wiley-VCH , 547-578 (2014) 
    http://dx.doi.org/10.1002/9783527647064.ch26  
  • Widera M, Klein NA, Cinar Y, Funke SA, Willbold D, Schaal H 
    The D-amino acid peptide D3 reduces amyloid fibril boosted HIV-1 infectivity 
    AIDS Res. Therapy 11, 1 (2014) 
  • Yi T, Zhai B, Yu Y, Kiyotsugu Y, Raschle T, Etzkorn M, Seo HC, Nagiec M, Luna RE, Reinherz EL, Blenis J, Gygi SP, Wagner G 
    Quantitative phosphoproteomic analysis reveals system-wide signaling pathways downstream of SDF-1/CXCR4 in breast cancer stem cells 
    PNAS 111(21), E2182-E2190 (2014) 
    http://dx.doi.org/10.1073/pnas.1404943111  
    http://dx.doi.org/10.1073/pnas.1405991111  
    See also PNAS highlight commentary (follow second link) 
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